Channel name check for CyCIF structure with new CSV format

labsyspharm / quantification

Quantification module for mcmicro

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Channel name check for CyCIF structure with new CSV format #15

Closed JoshuaHess12 closed 4 years ago

JoshuaHess12 commented 4 years ago

Check for CyCIF CSV structure with cycle number as suffix in channel names if the names are not unique. Otherwise, assume the CSV has a single column titled "marker_name" and check for unique names by adding counter suffix to non-unique channels.

DenisSch commented 4 years ago

Adresses #14 Thank you @JoshuaHess12