labsyspharm / quantification

Quantification module for mcmicro
https://github.com/labsyspharm/mcmicro
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Multiple mask option #21

Closed JoshuaHess12 closed 4 years ago

JoshuaHess12 commented 4 years ago

Addition for using multiple for single z-stack image.

DenisSch commented 4 years ago

@JoshuaHess12 Awesome - I will test and get back to you!

DenisSch commented 4 years ago

@JoshuaHess12 I just tested the code in mcmicro and realized that spatial information is not included. Something is off with get_spatial

DenisSch commented 4 years ago

@JoshuaHess12 FYI - It still does work for one image