Fixed str dtype for Unknown cells, Closes #107

labsyspharm / scimap

Spatial Single-Cell Analysis Toolkit

https://scimap.xyz/

MIT License

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Fixed str dtype for Unknown cells, Closes #107 #109

Closed emmanuel-contreras closed 1 month ago

emmanuel-contreras commented 1 month ago

This PR fixes the issue in sm.tl.phenotype_cells where Unknows cells get a dtype of np.str_ which is inconsistent with other phenotype labels having a dtype of str which results in an error in sklearn due to mismatched dtypes.

ajitjohnson commented 1 month ago

Thank you so much @emmanuel-contreras