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labsyspharm / scimap

Spatial Single-Cell Analysis Toolkit
https://scimap.xyz/
MIT License
71 stars 24 forks source link

Can I gate .qptiff image? #72

Open xyin0918 opened 1 year ago

xyin0918 commented 1 year ago

Hi all, I am recently learning this package. When I get into the phenotyping part, first I need to manually gate my image. But my image is generated by qupath software and the image type is .qptiff. Napari seems could not read in .qptiff. I wonder if anyone worked with .qptiff and how do you do the gating? Thanks!

ajitjohnson commented 8 months ago

I apologize for missing this issue. For some reason, I have not been receiving notifications for the issues raised in this channel. Does the issue still persist, and would you need help? Thank you.