laminlabs / bionty-base

Access public biological ontologies.
https://bionty-base.lamin.ai
Apache License 2.0
16 stars 2 forks source link

Manages parquet files using bionty-assets instance #361

Closed sunnyosun closed 1 year ago

sunnyosun commented 1 year ago

In addition to uploading ontology files, we could also upload the parquet files.

This will:

  1. speed up the initial download for each entity if users only need to access .df() and .lookup(), as users will just download the parquet files
  2. only when users access .ontology, the ontology file (owl, obo, etc) will be downloaded
  3. guarantee the data lineage of the ontology file → parquet file