laminlabs lamin-usecases issues

laminlabs / lamin-usecases

Use cases.

https://docs.lamin.ai

Apache License 2.0

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✨Iterate on perturbation use case

#156 Zethson opened 59 minutes ago
1
✨ Format all notebooks

#155 Zethson closed 1 hour ago
1
Python 3.11 support

#154 Zethson closed 1 hour ago
2
📝 Track all anndatas in scrna-tiledbsoma

#153 Koncopd closed 1 week ago
1
📝 Link access pages

#152 Zethson closed 2 weeks ago
0
💚 Update github actions

#151 Koncopd closed 2 weeks ago
1
💄 Polish `scrna-tiledbsoma`

#150 falexwolf closed 2 weeks ago
2
📝 Append `AnnData` to `tilledbsoma` store in scrna6

#149 Koncopd closed 3 weeks ago
1
:bug: Fix analysis-flow registration

#148 Zethson closed 3 weeks ago
1
♻️ Signature change of save_tiledbsoma_experiment in scrna6

#147 Koncopd closed 3 weeks ago
1
♻️ Call `save_tiledbsoma_experiment` via `ln.integrations` in scrna6

#146 Koncopd closed 4 weeks ago
1
🐛 Fix install of old scanpy

#145 Koncopd closed 4 weeks ago
1
📝 Use `save_tiledbsoma_experiment` in scrna6

#144 Koncopd closed 4 weeks ago
1
♻️ Simplify syntax

#143 falexwolf closed 1 month ago
1
✨ Add perturbation use-case

#142 Zethson closed 19 hours ago
12
📝 Use tiledbsoma integration API

#141 Koncopd closed 1 month ago
1
🐛 Fix scrna3 notebook

#140 Koncopd closed 1 month ago
1
⬆️ Update Curate

#139 sunnyosun closed 1 month ago
1
👷 Refactor CI & prettify public ontologies page

#138 falexwolf closed 1 month ago
1
📝 Mutate tiledbsoma store

#137 Koncopd closed 1 month ago
2
💚 Attempt fix

#136 falexwolf closed 1 month ago
1
🎨 Single bionty repo

#135 sunnyosun closed 1 month ago
0
📝 Rename Artifact.backed to Artifact.open

#134 Koncopd closed 2 months ago
1
🚚 Rename `Annotate` to `Curate`

#133 falexwolf closed 2 months ago
0
📝 Use Artifact.backed to connect to tiledbsoma

#132 Koncopd closed 2 months ago
1
📝 Add pip install for use cases

#131 sunnyosun closed 3 months ago
1
📝 Add tiledbsoma scrna guide

#130 Koncopd closed 3 months ago
2
♻️ Replace `.features.add_from_anndata()` with `.features._add_set_from_anndata()`

#129 falexwolf closed 3 months ago
1
♻️ Fixes and prettifiation for 0.72

#128 falexwolf closed 4 months ago
1
:pencil2: Fix standardization DF for entity notebooks

#127 Zethson closed 4 months ago
0
💚 Fix add_feature_set

#126 sunnyosun closed 4 months ago
1
✨ Add celltypist back

#125 sunnyosun closed 4 months ago
0
Add SPARQL demonstration

#124 Zethson closed 5 months ago
5
♻️ Refactor analysis flow

#123 sunnyosun closed 5 months ago
1
♻️ Use notebooks for project-flow

#122 sunnyosun closed 5 months ago
1
👷 Use uv

#121 sunnyosun closed 5 months ago
1
♻️ Refactor project flow

#120 sunnyosun closed 5 months ago
1
✏️ Fix query

#118 sunnyosun closed 5 months ago
1
Empty query in 3rd scrna guide

#117 falexwolf closed 5 months ago
1
♻️ Simplify multimodal

#116 falexwolf closed 5 months ago
1
🐛 Organism kwargs aren't propagated as they're supposed to in `annotate` flow

#115 falexwolf closed 5 months ago
1
✨ Update multimodal

#114 sunnyosun closed 5 months ago
1
⬆️ Update Annotate

#113 sunnyosun closed 5 months ago
1
🚚 Move the annotate nb to lamindb

#112 sunnyosun closed 6 months ago
1
🚚 Rename Validate to Annotate

#111 sunnyosun closed 6 months ago
1
🎨 Use validator for scrna

#110 sunnyosun closed 6 months ago
1
✨ Add validator guide here

#109 sunnyosun closed 6 months ago
0
💚 Update docs

#108 sunnyosun closed 6 months ago
0
Simplify text & add analysis-registries back to CI

#107 Zethson closed 7 months ago
1
Remove cell typist mention in analysis-registries

#106 Zethson closed 7 months ago
1