laminlabs / lamindb

A data framework for biology.
https://docs.lamin.ai
Apache License 2.0
129 stars 12 forks source link

`add_validated_from_var_index` is suggested but it doesn't even exist anymore #2108

Open Zethson opened 4 weeks ago

Zethson commented 4 weeks ago

Report

• mapping var_index on Gene.ensembl_gene_id
!    found 2 validated terms: 'ENSG00000255823', 'ENSG00000272370'
→ save terms via .add_validated_from_var_index()

AttributeError: 'Curator' object has no attribute 'add_validated_from_var_index'.

See https://github.com/search?q=repo%3Alaminlabs%2Flamindb+add_validated_from_var_index&type=code

It got removed recently.

Version information

No response

sunnyosun commented 2 weeks ago

Could you provide a mini input df to reproduce this?