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how to index the data into FAISS without using RecursiveCharacterTextSplitter? #17262

Closed nithinreddyyyyyy closed 9 months ago

nithinreddyyyyyy commented 9 months ago

Issue with current documentation:

below's the code which loads a CSV file and create a variable documents

# List of file paths for your CSV files
csv_files = ['1.csv']

# Iterate over the file paths and create a loader for each file
loaders = [CSVLoader(file_path=file_path, encoding="utf-8") for file_path in csv_files]

# Now, loaders is a list of CSVLoader instances, one for each file

# Optional: If you need to combine the data from all loaders
documents = []
for loader in loaders:
    data = loader.load()  # or however you retrieve data from the loader
    documents.extend(data)

now for code documents[1], below's the output

Document(page_content=": 1\nUnnamed: 0: 1\nText: Human Rights Guiding Principles\n We commit to respect internationally recognized human rights as expressed in International Bill of Human Rights meaning \n the Universal Declaration of Human Rights, the International Covenant on Civil and Political Rights and the International \n Covenant on Economic, Social and Cultural Rights, and International\nx1: 149.214813858271\ny1: 209.333904087543\nx2: 1548.48193973303\ny2: 899.030945822597\nBlock Type: LAYOUT_TEXT\nBlock ID: 54429a7486164c04b859d0a08ac75d54\npage_num: 2\nis_answer: 0", metadata={'source': '1.csv', 'row': 1})

normal method of chunking data and sending it to index is below

text_splitter = RecursiveCharacterTextSplitter(chunk_size=500, chunk_overlap=50)

texts = text_splitter.split_documents(documents)

vectorStore = FAISS.from_documents(texts, embeddings)

# Create a retriever for the vector database
retriever = vectorStore.as_retriever(search_kwargs={"k": 5})

docs = retriever.get_relevant_documents("can you return the details of banpu company hrdd?")

now, how to do i send the documents data to FAISS without splitting it again, because i've already chunked the data manually,

vectorStore = FAISS.from_documents(documents, embeddings)

# Create a retriever for the vector database
retriever = vectorStore.as_retriever(search_kwargs={"k": 5})

docs = retriever.get_relevant_documents("can you return the details of banpu company hrdd?")

but also also want to handle cases where a single row exceeds the OpenAI embeddings limit by splitting that row and appending it back while returning the answer. Can you write code for me? I just want a code like below

Idea or request for content:

No response

dosubot[bot] commented 9 months ago

šŸ¤–

Hey @nithinreddyyyyyy! Great to see you diving into another interesting challenge. How have you been?

Based on your requirements, you can use the embed_documents method from the OpenAIEmbeddings class to generate embeddings for your manually chunked data. This method handles the tokenization and embedding generation, respecting the set embedding context length and chunk size. It also supports both tiktoken and HuggingFace tokenizer based on the tiktoken_enabled flag.

Here's how you can use it:

from langchain_community.embeddings import OpenAIEmbeddings

# Initialize OpenAIEmbeddings
openai = OpenAIEmbeddings(openai_api_key="your-api-key")

# Assuming 'documents' is your list of manually chunked data
embeddings = openai.embed_documents(documents)

The embed_documents method internally calls the _get_len_safe_embeddings method which handles cases where a single row exceeds the OpenAI embeddings limit. It splits the tokens into chunks respecting the embedding_ctx_length and processes each chunk separately. The embeddings for each chunk are then averaged to get the final embedding for the text.

Once you have the embeddings, you can use the FAISS.from_vectors method to create a FAISS instance:

vectorStore = FAISS.from_vectors(embeddings, metadatas=[doc.metadata for doc in documents])

Here, metadatas is a list of metadata for each document. You can adjust this according to your needs.

Finally, you can create a retriever and get relevant documents as follows:

# Create a retriever for the vector database
retriever = vectorStore.as_retriever(search_kwargs={"k": 5})

docs = retriever.get_relevant_documents("can you return the details of banpu company hrdd?")

Please note that you need to replace "your-api-key" with your actual OpenAI API key. Also, ensure that the documents variable contains your manually chunked data.

For more details, you can refer to the source code of the OpenAIEmbeddings class and the FAISS class in the LangChain repository.

I hope this helps! If you have any further questions, feel free to ask.

Sources

#### About Dosu This response is meant to be useful and save you time. It is **not meant to be a precise solution**, but rather a starting point for your own research. Help me be more useful! Please leave a šŸ‘ if this is helpful and šŸ‘Ž if it is irrelevant. If you want to continue the conversation, start your reply with @dosu-bot.
nithinreddyyyyyy commented 9 months ago

šŸ¤–

Hey @nithinreddyyyyyy! Great to see you diving into another interesting challenge. How have you been?

Based on your requirements, you can use the embed_documents method from the OpenAIEmbeddings class to generate embeddings for your manually chunked data. This method handles the tokenization and embedding generation, respecting the set embedding context length and chunk size. It also supports both tiktoken and HuggingFace tokenizer based on the tiktoken_enabled flag.

Here's how you can use it:

from langchain_community.embeddings import OpenAIEmbeddings

# Initialize OpenAIEmbeddings
openai = OpenAIEmbeddings(openai_api_key="your-api-key")

# Assuming 'documents' is your list of manually chunked data
embeddings = openai.embed_documents(documents)

The embed_documents method internally calls the _get_len_safe_embeddings method which handles cases where a single row exceeds the OpenAI embeddings limit. It splits the tokens into chunks respecting the embedding_ctx_length and processes each chunk separately. The embeddings for each chunk are then averaged to get the final embedding for the text.

Once you have the embeddings, you can use the FAISS.from_vectors method to create a FAISS instance:

vectorStore = FAISS.from_vectors(embeddings, metadatas=[doc.metadata for doc in documents])

Here, metadatas is a list of metadata for each document. You can adjust this according to your needs.

Finally, you can create a retriever and get relevant documents as follows:

# Create a retriever for the vector database
retriever = vectorStore.as_retriever(search_kwargs={"k": 5})

docs = retriever.get_relevant_documents("can you return the details of banpu company hrdd?")

Please note that you need to replace "your-api-key" with your actual OpenAI API key. Also, ensure that the documents variable contains your manually chunked data.

For more details, you can refer to the source code of the OpenAIEmbeddings class and the FAISS class in the LangChain repository.

I hope this helps! If you have any further questions, feel free to ask.

Sources

About Dosu

This response is meant to be useful and save you time. It is not meant to be a precise solution, but rather a starting point for your own research.

Help me be more useful! Please leave a šŸ‘ if this is helpful and šŸ‘Ž if it is irrelevant.

If you want to continue the conversation, start your reply with @dosu-bot.

It has returned below issue, can you please look into it

---------------------------------------------------------------------------
TypeError                                 Traceback (most recent call last)
[<ipython-input-18-791eb5000c7b>](https://localhost:8080/#) in <cell line: 7>()
      5 
      6 # Assuming 'documents' is your list of manually chunked data
----> 7 embeddings = openai.embed_documents(documents)
      8 
      9 vectorStore = FAISS.from_vectors(embeddings, metadatas=[doc.metadata for doc in documents])

2 frames
[/usr/local/lib/python3.10/dist-packages/langchain_community/embeddings/openai.py](https://localhost:8080/#) in embed_documents(self, texts, chunk_size)
    666         #       than the maximum context and use length-safe embedding function.
    667         engine = cast(str, self.deployment)
--> 668         return self._get_len_safe_embeddings(texts, engine=engine)
    669 
    670     async def aembed_documents(

[/usr/local/lib/python3.10/dist-packages/langchain_community/embeddings/openai.py](https://localhost:8080/#) in _get_len_safe_embeddings(self, texts, engine, chunk_size)
    469                     text = text.replace("\n", " ")
    470 
--> 471                 token = encoding.encode(
    472                     text=text,
    473                     allowed_special=self.allowed_special,

[/usr/local/lib/python3.10/dist-packages/tiktoken/core.py](https://localhost:8080/#) in encode(self, text, allowed_special, disallowed_special)
    114             if not isinstance(disallowed_special, frozenset):
    115                 disallowed_special = frozenset(disallowed_special)
--> 116             if match := _special_token_regex(disallowed_special).search(text):
    117                 raise_disallowed_special_token(match.group())
    118 

TypeError: expected string or buffer

below is the documents[0] format

Document(page_content=': 0\nUnnamed: 0: 0\nText: AMD L\nx1: 1316.616076231\ny1: 113.813292980194\nx2: 1579.33993190527\ny2: 170.601672306657\nBlock Type: LAYOUT_FIGURE\nBlock ID: 2a2a4e4ccdb04e41988882bd6c4512c0\npage_num: 2\nis_answer: 0', metadata={'source': '1.csv', 'row': 0})

can you please help me resolving this?

dosubot[bot] commented 9 months ago

šŸ¤–

šŸ¤–

The error you're encountering is due to the fact that the embed_documents method of the OpenAIEmbeddings class expects a list of strings as input, but you're providing a list of Document objects. The embed_documents method tries to apply the replace method to each element in the list, which works for strings but not for Document objects, hence the TypeError.

To resolve this issue, you need to extract the page_content from each Document object and pass that to the embed_documents method. Here's how you can do it:

# Extract page_content from each Document object
texts = [doc.page_content for doc in documents]

# Generate embeddings
embeddings = openai.embed_documents(texts)

Then, you can proceed with creating the FAISS instance and the retriever as you've done in your code.

This solution is based on a similar issue found in the LangChain repository: AttributeError: Document object has not attribute replace. The user in that issue encountered a similar problem and resolved it by extracting the page_content from each Document object before passing the list to the embed_documents method.

I hope this helps! If you encounter any further issues, please let me know.

Sources

#### About Dosu This response is meant to be useful and save you time. It is **not meant to be a precise solution**, but rather a starting point for your own research. Help me be more useful! Please leave a šŸ‘ if this is helpful and šŸ‘Ž if it is irrelevant. If you want to continue the conversation, start your reply with @dosu-bot.
nithinreddyyyyyy commented 9 months ago

šŸ¤– Hey @nithinreddyyyyyy! Great to see you diving into another interesting challenge. How have you been? Based on your requirements, you can use the embed_documents method from the OpenAIEmbeddings class to generate embeddings for your manually chunked data. This method handles the tokenization and embedding generation, respecting the set embedding context length and chunk size. It also supports both tiktoken and HuggingFace tokenizer based on the tiktoken_enabled flag. Here's how you can use it:

from langchain_community.embeddings import OpenAIEmbeddings

# Initialize OpenAIEmbeddings
openai = OpenAIEmbeddings(openai_api_key="your-api-key")

# Assuming 'documents' is your list of manually chunked data
embeddings = openai.embed_documents(documents)

The embed_documents method internally calls the _get_len_safe_embeddings method which handles cases where a single row exceeds the OpenAI embeddings limit. It splits the tokens into chunks respecting the embedding_ctx_length and processes each chunk separately. The embeddings for each chunk are then averaged to get the final embedding for the text. Once you have the embeddings, you can use the FAISS.from_vectors method to create a FAISS instance:

vectorStore = FAISS.from_vectors(embeddings, metadatas=[doc.metadata for doc in documents])

Here, metadatas is a list of metadata for each document. You can adjust this according to your needs. Finally, you can create a retriever and get relevant documents as follows:

# Create a retriever for the vector database
retriever = vectorStore.as_retriever(search_kwargs={"k": 5})

docs = retriever.get_relevant_documents("can you return the details of banpu company hrdd?")

Please note that you need to replace "your-api-key" with your actual OpenAI API key. Also, ensure that the documents variable contains your manually chunked data. For more details, you can refer to the source code of the OpenAIEmbeddings class and the FAISS class in the LangChain repository. I hope this helps! If you have any further questions, feel free to ask.

Sources

About Dosu

This response is meant to be useful and save you time. It is not meant to be a precise solution, but rather a starting point for your own research. Help me be more useful! Please leave a šŸ‘ if this is helpful and šŸ‘Ž if it is irrelevant. If you want to continue the conversation, start your reply with @dosu-bot.

It has returned below issue, can you please look into it

---------------------------------------------------------------------------
TypeError                                 Traceback (most recent call last)
[<ipython-input-18-791eb5000c7b>](https://localhost:8080/#) in <cell line: 7>()
      5 
      6 # Assuming 'documents' is your list of manually chunked data
----> 7 embeddings = openai.embed_documents(documents)
      8 
      9 vectorStore = FAISS.from_vectors(embeddings, metadatas=[doc.metadata for doc in documents])

2 frames
[/usr/local/lib/python3.10/dist-packages/langchain_community/embeddings/openai.py](https://localhost:8080/#) in embed_documents(self, texts, chunk_size)
    666         #       than the maximum context and use length-safe embedding function.
    667         engine = cast(str, self.deployment)
--> 668         return self._get_len_safe_embeddings(texts, engine=engine)
    669 
    670     async def aembed_documents(

[/usr/local/lib/python3.10/dist-packages/langchain_community/embeddings/openai.py](https://localhost:8080/#) in _get_len_safe_embeddings(self, texts, engine, chunk_size)
    469                     text = text.replace("\n", " ")
    470 
--> 471                 token = encoding.encode(
    472                     text=text,
    473                     allowed_special=self.allowed_special,

[/usr/local/lib/python3.10/dist-packages/tiktoken/core.py](https://localhost:8080/#) in encode(self, text, allowed_special, disallowed_special)
    114             if not isinstance(disallowed_special, frozenset):
    115                 disallowed_special = frozenset(disallowed_special)
--> 116             if match := _special_token_regex(disallowed_special).search(text):
    117                 raise_disallowed_special_token(match.group())
    118 

TypeError: expected string or buffer

below is the documents[0] format

Document(page_content=': 0\nUnnamed: 0: 0\nText: AMD L\nx1: 1316.616076231\ny1: 113.813292980194\nx2: 1579.33993190527\ny2: 170.601672306657\nBlock Type: LAYOUT_FIGURE\nBlock ID: 2a2a4e4ccdb04e41988882bd6c4512c0\npage_num: 2\nis_answer: 0', metadata={'source': '1.csv', 'row': 0})

can you please help me resolving this?

below's the updated code

from langchain_community.embeddings import OpenAIEmbeddings

# Initialize OpenAIEmbeddings
openai = OpenAIEmbeddings(openai_api_key="sk-")

# Extract page_content from each Document object
texts = [doc.page_content for doc in documents]

# Generate embeddings
embeddings = openai.embed_documents(texts)

vectorStore = FAISS.from_vectors(embeddings, metadatas=[doc.metadata for doc in documents])

# Create a retriever for the vector database
retriever = vectorStore.as_retriever(search_kwargs={"k": 5})

docs = retriever.get_relevant_documents("data related to hrdd")

and the error is below

---------------------------------------------------------------------------
AttributeError                            Traceback (most recent call last)
[<ipython-input-41-4245045a3e1c>](https://localhost:8080/#) in <cell line: 12>()
     10 embeddings = openai.embed_documents(texts)
     11 
---> 12 vectorStore = FAISS.from_vectors(embeddings, metadatas=[doc.metadata for doc in documents])
     13 
     14 # Create a retriever for the vector database

AttributeError: type object 'FAISS' has no attribute 'from_vectors'

can you please help me out resolving this error?

dosubot[bot] commented 9 months ago

šŸ¤–

Based on the context provided, it seems like you're encountering two main issues. Let's address them one by one.

  1. TypeError: expected string or buffer: This error is likely occurring because the OpenAIEmbeddings class expects a list of strings as input, but you're providing it with a list of Document objects. You can resolve this by extracting the page_content from each Document object and passing that to the embed_documents method. Here's how you can do it:
# Extract page_content from each Document object
docs_as_str = [doc.page_content for doc in documents]

# Generate the embeddings
embeddings = OpenAIEmbeddings()
embedded_docs = embeddings.embed_documents(docs_as_str)
  1. AttributeError: type object 'FAISS' has no attribute 'from_vectors': The FAISS class in LangChain does not have a from_vectors method. Instead, you should use the from_documents method to create a FAISS instance from a list of documents. Here's how you can do it:
# Initialize FAISS
db = FAISS.from_documents(embedded_docs, embeddings)

In this code, embedded_docs is a list of documents (each document being a string), and embeddings is an instance of the OpenAIEmbeddings class.

I hope this helps! If you have any other questions or run into any more issues, feel free to ask.

For more information, you can refer to the following sources:

Sources

#### About Dosu This response is meant to be useful and save you time. It is **not meant to be a precise solution**, but rather a starting point for your own research. Help me be more useful! Please leave a šŸ‘ if this is helpful and šŸ‘Ž if it is irrelevant. If you want to continue the conversation, start your reply with @dosu-bot.