langcog / metalab2

MetaLab -- Community-augmented meta-analysis
http://metalab.stanford.edu/
MIT License
21 stars 8 forks source link

visualization page does not exist #76

Closed christinabergmann closed 5 years ago

christinabergmann commented 6 years ago

http://metalab.stanford.edu/app.html?id=visualization I get an error here

christinabergmann commented 6 years ago

And it's back, any ideas @amsan7?

amsan7 commented 6 years ago

fixed. the repo is disappearing on the server, but not sure why. there is a commit to master on aug 3 that coincided with the server issue, but unclear why

amsan7 commented 6 years ago

oh actually that commit did cause an error:

Start main_builder.R execution. 2018-08-07T18:37:58Z
arguments imply differing number of rows: 1, 0object 'datasets' not foundError in eval(ei, envir) : object 'datasets' not found
Calls: source -> withVisible -> eval -> eval
Execution halted
amsan7 commented 6 years ago

@cissard in this commit https://github.com/langcog/metalab2/commit/21f925ebe64f9a69c3e8d6a03a8c170b0a9130e2 you forgot to put the "src" in the datasets.yml

in general, it's a good idea to check if the shiny apps are working a day after you commit something to master @christinabergmann @cissard. when something is wrong, the deploy script breaks, and the repo turns into this weird unstable state

christinabergmann commented 6 years ago

Ah thank you.

cissard commented 6 years ago

Hi Alessandro,

From what I understand the src field links to a picture to illustrate the MA, is that correct? If yes I don’t think we have any specific ones for these MA. For the moment I will reuse the same as other MA, and I will check that the shiny apps are working tomorrow.

Best,

Cécile Le 7 août 2018 à 20:59, Alessandro notifications@github.com<mailto:notifications@github.com> a écrit :

@cissardhttps://github.com/cissard in this commit 21f925ehttps://github.com/langcog/metalab2/commit/21f925ebe64f9a69c3e8d6a03a8c170b0a9130e2 you forgot to put the "src" in the datasets.yml

in general, it's a good idea to check if the shiny apps are working a day after you commit something to master @christinabergmannhttps://github.com/christinabergmann @cissardhttps://github.com/cissard. when something is wrong, the deploy script breaks, and the repo turns into this weird unstable state

— You are receiving this because you were mentioned. Reply to this email directly, view it on GitHubhttps://github.com/langcog/metalab2/issues/76#issuecomment-411165066, or mute the threadhttps://github.com/notifications/unsubscribe-auth/Ae7x49q9kKrWNKi7a-4ZF64pWgRa64Wmks5uOeNxgaJpZM4UiYHy.

christinabergmann commented 6 years ago

I've added two images, working on the other two. @cissard did you ask the authors for an illustration? Might be easiest.

cissard commented 6 years ago

No but I can do that when I ask them about the moderators.

Le 8 août 2018 à 12:23, Christina Bergmann notifications@github.com<mailto:notifications@github.com> a écrit :

I've added two images, working on the other two. @cissardhttps://github.com/cissard did you ask the authors for an illustration? Might be easiest.

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amsan7 commented 6 years ago

ok, now shiny apps are up.

also, as a way to test whether you guys did everything right, you should run the following commands on your machine before committing and pushing:

setwd("/directory/of/metalab/scripts/repo/metalab2/scripts")
source("main_builder.R")

It will fail pretty quickly if there's a major error. Otherwise, you have to read the output yourself. For example, there are problems with the recent MAs added, e.g.,

Can't load dataset 'Sound symbolism' with key '1oQpM21C0MPdljdTeacsKr7zIe46cabzD5fizlgp5w_U'. Exception: Error in curl::curl_fetch_memory(url, handle = handle): Operation was aborted by an application callback

shotsuji commented 6 years ago

Great, I’ll add that to my (in progress) best practices document!!

On Wed, Aug 8, 2018 at 8:58 PM Alessandro notifications@github.com wrote:

ok, now shiny apps are up.

also, as a way to test whether you guys did everything right, you should run the following commands on your machine before committing and pushing:

setwd("/directory/of/metalab/scripts/repo/metalab2/scripts") source("main_builder.R")

It will fail pretty quickly if there's a major error. Otherwise, you have to read the output yourself. For example, there are problems with the recent MAs added, e.g.,

Can't load dataset 'Sound symbolism' with key '1oQpM21C0MPdljdTeacsKr7zIe46cabzD5fizlgp5w_U'. Exception: Error in curl::curl_fetch_memory(url, handle = handle): Operation was aborted by an application callback

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/langcog/metalab2/issues/76#issuecomment-411515481, or mute the thread https://github.com/notifications/unsubscribe-auth/APkTmz66QGadd1Ip65-KrQjn1eMLOPnqks5uOzTjgaJpZM4UiYHy .

-- Postdoctoral Researcher University of Pennsylvania, Philadephia, PA, USA Laboratoire de Sciences Cognitives et Psycholinguistique, Paris, France Website: https://sites.google.com/site/tsujish/home Blog: https://cogtales.wordpress.com/

christinabergmann commented 6 years ago

Just letting you all know that the visualizations are down again.

mcfrank commented 6 years ago

ugh - there's not even another commit to the repo. we need to work on stability for the site. sorry about this. @Alessandro Sanchez sanchez7@stanford.edu and @Benjamin Edward deMayo bdemayo@stanford.edu are going to meet next week and talk about some maintenance stuff.

Mike

On Fri, Sep 7, 2018 at 10:23 AM Christina Bergmann notifications@github.com wrote:

Just letting you all know that the visualizations are down again.

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/langcog/metalab2/issues/76#issuecomment-419509174, or mute the thread https://github.com/notifications/unsubscribe-auth/ABGulyeCjHMbMKBykIt__t5sEha83w5Rks5uYquUgaJpZM4UiYHy .

amsan7 commented 6 years ago

it was some weird git index error. a lot of issues are caused by the automatic deploy that happens every day -- will try and think through a better way to do this

christinabergmann commented 6 years ago

Oh annoying, thanks so much for checking and fixing it!!!