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langmead-lab
/
snapcount
R Package for interfacing with Snaptron for rapid querying of expression counts
MIT License
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Snaptron down
#19
lonsbio
opened
2 years ago
1
Query with thousands of intervals
#18
PedroBarbosa
opened
3 years ago
4
added gsub for to convert '?' strands to '*'
#17
areyesq89
opened
4 years ago
1
NSE in column filter doesn't work w/ variables
#16
BenLangmead
closed
3 years ago
3
inconsistent row filter application?
#15
ChristopherWilks
closed
4 years ago
1
Vignette refinement
#14
BenLangmead
closed
5 years ago
0
if basic query returns 0 rows (other than header) return null
#13
ChristopherWilks
closed
5 years ago
2
expand list of compilations to full set supported by Snaptron
#12
ChristopherWilks
closed
5 years ago
1
SRAv2 failing on sample filtering
#11
ChristopherWilks
closed
5 years ago
2
SSC result "counts" column should be an integer rather than a list
#10
ChristopherWilks
closed
5 years ago
2
`Coordinates` class for coordinate_modifier argument should be public
#9
ChristopherWilks
closed
5 years ago
1
Merge/union should now return an RSE
#8
ChristopherWilks
closed
5 years ago
1
Restrict output columns to only those samples queried in the sample filter
#7
ChristopherWilks
closed
5 years ago
2
PSI and JIR high level functions will fail first time they're called with a "try-error", but work subsequently
#6
ChristopherWilks
closed
5 years ago
2
Inconsistent response from Shared Sample Count (SSC) high level function
#5
ChristopherWilks
closed
5 years ago
6
PSI returns >0 values where one inclusion group is 0
#4
ChristopherWilks
closed
5 years ago
1
Remove default "g1" group from Tissue Specificty output
#3
ChristopherWilks
opened
5 years ago
0
Tissue Specificity (TS) High Level query replaces tissue type "NA" with 0
#2
ChristopherWilks
closed
5 years ago
1
GenomicRanges=>SnaptronQueryBuilder support
#1
ChristopherWilks
closed
5 years ago
1