An application for parameterization of biological models available in SBML and BNGL formats. Features include parallelization, metaheuristic optimization algorithms, and an adaptive Markov chain Monte Carlo (MCMC) sampling algorithm.
Using the normalization key to map a normalization type to an exp file creates a confusing situation when there is also a prop file with the same suffix.
Looks like what currently happens is if you use the syntax normalization = init : data.exp, all columns of simulation suffix data get normalized for all uses. So if you also had a data.prop for something not even appearing in data.exp, it would get normalized.
Using the
normalizationkey to map a normalization type to an exp file creates a confusing situation when there is also a prop file with the same suffix.Looks like what currently happens is if you use the syntax
normalization = init : data.exp, all columns of simulation suffixdataget normalized for all uses. So if you also had a data.prop for something not even appearing in data.exp, it would get normalized.