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lanl / PyBNF

An application for parameterization of biological models available in SBML and BNGL formats. Features include parallelization, metaheuristic optimization algorithms, and an adaptive Markov chain Monte Carlo (MCMC) sampling algorithm.
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diff.txt error #346

Open ColinGros opened 10 months ago

ColinGros commented 10 months ago

Hello,

I am trying to run a file using the 'am' fit function, and I have been getting this error for a while now and can not figure out what is wrong. The error says "FileNotFoundError: /Path/Here/adaptive_files/diff.txt not found". Some of my other files that once ran 'am' perfectly fine are also now not working, I am not sure what has changed. I have attached photos of the error message, the .conf and .bngl files, and the log file.

Are there any ideas on where the error is and how to fix it, or where to look in order to fix this error?

Thank you!

Screenshot 2023-10-25 at 8 13 34 AM Screenshot 2023-10-25 at 8 13 31 AM Screenshot 2023-10-25 at 8 13 27 AM Screenshot 2023-10-25 at 8 13 24 AM Screenshot 2023-10-25 at 8 13 21 AM Screenshot 2023-10-25 at 8 13 07 AM

bnf_20231025-081230.log

wshlavacek commented 10 months ago

RTDM Sent from my iPhoneOn Oct 25, 2023, at 9:23 AM, ColinGros @.***> wrote: Hello, I am trying to run a file using the 'am' fit function, and I have been getting this error for a while now and can not figure out what is wrong. The error says "FileNotFoundError: /Path/Here/adaptive_files/diff.txt not found". Some of my other files that once ran 'am' perfectly fine are also now not working, I am not sure what has changed. I have attached photos of the error message, the .conf and .bngl files, and the log file. Are there any ideas on where the error is and how to fix it, or where to look in order to fix this error? Thank you!

bnf_20231025-081230.log

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