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lanl / dfnWorks

dfnWorks is a parallelized computational suite to generate three-dimensional discrete fracture networks (DFN) and simulate flow and transport. If you download the software please fill out our interest form to stay up to date on releases https://goo.gl/forms/VE39oKsyp4LVC6Gj2 and join our google group https://groups.google.com/d/forum/dfnworks-users . Precompiled Docker Container https://hub.docker.com/r/ees16/dfnworks
https://dfnworks.lanl.gov/
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How to run the pythonn example #13

Closed xuhenry closed 2 years ago

xuhenry commented 3 years ago

Dear all, I have successfully installed the pydfnworks, but I don't known how to run the examples. There are some errors when I run the script:

~/OpenSource/dfnWorks/examples/pruning$ python3 run_prune_explicit_part1.py Error checking dfnworks_PATH is not a directory. Please check the path in either pydfnworks/general/paths.py or .dfnworksrc. Exiting

Is there anyone can help me ? Thanks a lot! Best regards, Henry

hymanjd commented 3 years ago

Hi Henry,

Did you run fix_paths.py in pydfnworks/bin and correct your other paths in "pydfnworks/general/paths.py"?

Jeffrey

xuhenry commented 3 years ago

Hello Hymanjd, Yes I have ran fix_paths.py, and show

:/home/xxxx/OpenSource replacing DUMMY with /home/xxxx/OpenSource

Thanks a lot! Henry

hymanjd commented 3 years ago

Is that the correct path for your installation? What's in your paths.py file?

WuHuiLLNL commented 3 years ago

Hi, I am trying to use the pydfnworks package, and got similar problems as Henry mentioned. In "paths.py" where we should specify environment paths, there are several paths that I don't know how to set, such as PETSC_DIR, PETSC_ARCH, PFLOTRAN_EXE, LAGRIT_EXE and FEHM_EXE. Are these directories and executables already in the dfnworks or I have to install them by myself?

Thanks, Hui

hymanjd commented 3 years ago

Hi Hui,

You have to install and build PETSC, LaGriT, PFLOTRAN, and FEHM. They do not come with the git version of dfnWorks. Once you install them, then you can add the paths. Alternatively, you can create a .dfnworksrc in your home directory

However, they are precompiled with the docker container of the package

https://hub.docker.com/r/ees16/dfnworks

Jeffrey

WuHuiLLNL commented 3 years ago

@hymanjd Hi Jeffrey, thank you for the response. I will try the docker container then.