Closed LLCampos closed 7 years ago
When running:
bash get_entities.sh 1 A 'water potassium oxygen' HMDB_ChEMBL_ChEBI
We get:
1 A 0 5 0.378665 water unknown 1 1 A 6 15 0.54488 potassium unknown 1 1 A 16 22 0.441889 oxygen unknown 1
But when we run:
bash get_entities.sh 1 A 'water, potassium, oxygen' HMDB_ChEMBL_ChEBI
1 A 0 5 0.378665 water unknown 1 1 A 18 24 0.441889 oxygen unknown 1
Strangely, "water" is annotated but "potassium" isn't, although both precede a comma.
When running:
bash get_entities.sh 1 A 'water potassium oxygen' HMDB_ChEMBL_ChEBI
We get:
But when we run:
bash get_entities.sh 1 A 'water, potassium, oxygen' HMDB_ChEMBL_ChEBI
We get:
Strangely, "water" is annotated but "potassium" isn't, although both precede a comma.