search

laszukdawid / PyEMD

Python implementation of Empirical Mode Decompoisition (EMD) method
https://pyemd.readthedocs.io/
Apache License 2.0
867 stars 224 forks source link

PyEMD installation version 0.5.1 fails on Linux #69

Closed Roymprog closed 4 years ago

Roymprog commented 4 years ago

In my project there is a dependency on textacy, that depends on PyEMD.

It seems I cannot install this package using pip by running pip install -r requirements.txt --no-cache-dir. Pip itself is installed using anaconda, if that's relevant.

The requirements.txt looks as follows:

textacy==0.7.0 --> depends on pyemd >= 0.3, so tries to get 0.5.1(latest as of now)
pandas==0.21
gensim==3.3.0
xlrd==1.1.0
abbreviations==0.1.5
spacy-langdetect==0.1.2
PyPDF2==1.26.0
matplotlib==3.1.0
wordcloud==1.5.0
scattertext==0.0.2.52

I've tried changing the numpy version, as I thought it might have to do with numpy version compatibility. Using the latest version(1.18.1) of numpy does fix this.

Click to see error ``` Collecting pyemd>=0.3.0 (from textacy==0.7.0->-r requirements.txt (line 1)) Downloading ***/api/pypi/releases_pypi_all/packages/packages/c0/c5/7fea8e7a71cd026b30ed3c40e4c5ea13a173e28f8855da17e25271e8f545/pyemd-0.5.1.tar.gz (91kB) 100% |████████████████████████████████| 92kB 5.0MB/s Complete output from command python setup.py egg_info: running egg_info creating pip-egg-info/pyemd.egg-info writing pip-egg-info/pyemd.egg-info/PKG-INFO writing dependency_links to pip-egg-info/pyemd.egg-info/dependency_links.txt writing requirements to pip-egg-info/pyemd.egg-info/requires.txt writing top-level names to pip-egg-info/pyemd.egg-info/top_level.txt writing manifest file 'pip-egg-info/pyemd.egg-info/SOURCES.txt' Traceback (most recent call last): File "", line 1, in File "/tmp/pip-install-dr1_6j7o/pyemd/setup.py", line 121, in 'Programming Language :: Python :: 3.6', File "/home/user/.local/lib/python3.6/site-packages/setuptools/__init__.py", line 140, in setup return distutils.core.setup(**attrs) File "/home/user/Applications/anaconda3/envs/py36_txt2insights/lib/python3.6/distutils/core.py", line 148, in setup dist.run_commands() File "/home/user/Applications/anaconda3/envs/py36_txt2insights/lib/python3.6/distutils/dist.py", line 955, in run_commands self.run_command(cmd) File "/home/user/Applications/anaconda3/envs/py36_txt2insights/lib/python3.6/distutils/dist.py", line 974, in run_command cmd_obj.run() File "/home/user/.local/lib/python3.6/site-packages/setuptools/command/egg_info.py", line 296, in run self.find_sources() File "/home/user/.local/lib/python3.6/site-packages/setuptools/command/egg_info.py", line 303, in find_sources mm.run() File "/home/user/.local/lib/python3.6/site-packages/setuptools/command/egg_info.py", line 534, in run self.add_defaults() File "/home/user/.local/lib/python3.6/site-packages/setuptools/command/egg_info.py", line 570, in add_defaults sdist.add_defaults(self) File "/home/user/.local/lib/python3.6/site-packages/setuptools/command/py36compat.py", line 36, in add_defaults self._add_defaults_ext() File "/home/user/.local/lib/python3.6/site-packages/setuptools/command/py36compat.py", line 119, in _add_defaults_ext build_ext = self.get_finalized_command('build_ext') File "/home/user/Applications/anaconda3/envs/py36_txt2insights/lib/python3.6/distutils/cmd.py", line 299, in get_finalized_command cmd_obj.ensure_finalized() File "/home/user/Applications/anaconda3/envs/py36_txt2insights/lib/python3.6/distutils/cmd.py", line 107, in ensure_finalized self.finalize_options() File "/tmp/pip-install-dr1_6j7o/pyemd/setup.py", line 78, in finalize_options self.include_dirs.append(numpy.get_include()) AttributeError: module 'numpy' has no attribute 'get_include' ```
Roymprog commented 4 years ago

Oops, issue added to the wrong PyEMD project.