This merge does a number of things I have been working on in a separate branch. I have used the Dev branch and it is ready to merge. I have also updated the readme and tutorial to match the changes.
In brief I have :
cleaned up the repo and removed files that are no longer needed.
Added the ability to choose a number of variables at the start ( distribution, test direction, p value cut off etc)
Added the ability to start the pipeline after the alignment step.
This merge does a number of things I have been working on in a separate branch. I have used the Dev branch and it is ready to merge. I have also updated the readme and tutorial to match the changes.
In brief I have :
cleaned up the repo and removed files that are no longer needed.
Added the ability to choose a number of variables at the start ( distribution, test direction, p value cut off etc)
Added the ability to start the pipeline after the alignment step.