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lazear / sage

Proteomics search & quantification so fast that it feels like magic
https://sage-docs.vercel.app
MIT License
224 stars 44 forks source link

Error using docker image on ARM processor #155

Open kretep opened 1 month ago

kretep commented 1 month ago

I'm getting this error when running sage inside a docker container on my mac (ARM processor), using the image in the GHCR.

root@bf99e12ee497:/app# sage --version rosetta error: failed to open elf at /lib64/ld-linux-x86-64.so.2 Trace/breakpoint trap

I suspect something might be wrong with the image. When I create an image myself, using a customized DockerFile and the ARM-built binaries, it works as expected.

lazear commented 1 month ago

I believe we only publish linux images for x86_64/ARM. Looks like you have pulled the x86_64 one - ARM one is here: docker pull ghcr.io/lazear/sage:v0.14.7@sha256:7954ac4cf4d92b90fd105247a2b2a9967d2b34308071afb1f1feb7c6eb379642. If you want to write a github workflow to publish a darwin/aarch64 docker image please submit a PR - otherwise I think it's a very niche use case :)

I would recommend just downloading the binaries and running them directly, or compiling yourself. Not much benefit to running sage in docker since it has no dependencies that need to be installed.