GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://www.nature.com/ncomms/2016/160415/ncomms11307/full/ncomms11307.html https://www.biorxiv.org/content/10.1101/720458v1
Hi, would it be possible to share graphmap2 index among multiple instances of the mapper? Something of the sort was available in STAR-mapper.
It'd be super beneficial for applications with on-the-fly mapping (ie. data coming from the sequencer in small batches) or where multiple instances of the mapper need to be launched simultaneously (my case). Creating/loading index for each instance is waste of time and resources, especially for larger references.
Cheers,
Hi, would it be possible to share graphmap2 index among multiple instances of the mapper? Something of the sort was available in STAR-mapper. It'd be super beneficial for applications with on-the-fly mapping (ie. data coming from the sequencer in small batches) or where multiple instances of the mapper need to be launched simultaneously (my case). Creating/loading index for each instance is waste of time and resources, especially for larger references. Cheers,