search

lbcb-sci / racon

Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads
MIT License
197 stars 34 forks source link

Trouble installing #10

Closed stxacp closed 4 years ago

stxacp commented 4 years ago

Hi,

I'm installing racon, and when I get to the make command I get these errors at the end:

ld: library not found for -ledlib_static clang: error: linker command failed with exit code 1 (use -v to see invocation) make[2]: [bin/racon] Error 1 make[1]: [CMakeFiles/racon.dir/all] Error 2 make: *** [all] Error 2

I'm not sure how to solve this, any ideas?

Cheers

rvaser commented 4 years ago

Hello, can you paste the commands you used to clone and build racon?

Best regards, Robert

stxacp commented 4 years ago

So, I followed the commands given in the installation instructions on the racon page. Weirdly though, when git cloning I had to install bioparser and all the other packages as they didn't down load when git cloning. Could this be why?

git clone --recursive https://github.com/lbcb-sci/racon.git racon cd racon mkdir build cd build cmake -DCMAKE_BUILD_TYPE=Release .. make

rvaser commented 4 years ago

Could be if you did not add --recursive in the command. This way only the main project is cloned without submodules. May I assume that you closing the issue means that you were able to compile it this time?

stxacp commented 4 years ago

Hey, yes, turns out I was being an idiot, completely missed that. Sorry for wasting your time!

rvaser commented 4 years ago

No problem, happens!:)