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lbcb-sci / racon

Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads
MIT License
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Metagenome polishing #28

Closed cmaggior closed 4 years ago

cmaggior commented 4 years ago

Hello, I'm interested in polishing a canu assembly of a metagenome, is it possible to input multiple read files and overlap files? e.g. multiple fastq and .sam files? Thanks!

rvaser commented 4 years ago

Hello, unfortunately you cannot pass multiple files in one run. You will need to run Racon for each pair separately.

Best regards, Robert

cmaggior commented 4 years ago

Okay, thank you!