Renames of services and version upgrades

[benjay10]

Some services could use a more consistent name. General rules:

• The names should be as short as possible, but still clear
• No 'service' in the name
• Harvesting related services prefixed with 'harvest_' (this was inconsistent with a mix of 'harvesting-' and 'harvest-')

A lot of core services are now more up to date. E.g. we now use the RedPencil version of Virtuoso, the new mu-cl-resources, ...