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leekgroup / recount

R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/
https://jhubiostatistics.shinyapps.io/recount/
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Download rse for a tissue from GTEx/TCGA #16

Closed lcolladotor closed 4 years ago

lcolladotor commented 5 years ago

Previously @jtleek has requested a function for loading just the RSE files for a given tissue from GTEx or TCGA. At least two people mentioned something similar at BioC2019.

This is a reminder for myself to implement this functionality :P

lcolladotor commented 4 years ago

By design, large projects will be broken up by tissue or other main covariate in recount3.