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Hide incomplete feature GUI controls #335

Closed leginonbot closed 8 months ago

leginonbot commented 8 months ago

Author Name: Amber Herold (Amber Herold) Original Redmine Issue: 335, https://emg.nysbc.org/redmine/issues/335 Original Date: 2010-04-08 Original Assignee: Pick-Wei Lau


Neil knows of some features that are not fully implemented that should be hidden for Appion 2.0.

leginonbot commented 8 months ago

Original Redmine Comment Author Name: Neil Voss (@vosslab) Original Date: 2010-04-16T18:11:05Z


Links to broken features reside in the inc/menuprocessing.php, selectFeatureAnalysis.php, and selectParticleAlignment.php

selectParticleAlignment.php:

IMAGIC Multi Reference Alignment (requires IMAGIC and the template stack thing, below)
CAN Reference-free alignment (runs but does not upload results)

selectFeatureAnalysis.php:

Cluster by Affinity Propagation (works but broken on large stacks)
IMAGIC Multivariate Statistical Analysis (dependent on IMAGIC version)

inc/menuprocessing.php: CTF Estimation

CtfTilt Estimation (works and uploads, but fails alot; there is a warning)

inc/menuprocessing.php: Particle Alignment

Template Stacks (this is Dmitry's thing)

inc/menuprocessing.php: Refine Reconstruction See [[Refinement_Package_Status]]

Frealign Refinement (almost)
SPIDER Refinement (broken)
Xmipp Refinement (broken)
IMAGIC Refinement (broken)

inc/menuprocessing.php: Tomography

inc/menuprocessing.php: Region Mask Creation Does any of this work? Anchi may know.

Crud Finding
Manual Masking
leginonbot commented 8 months ago

Original Redmine Comment Author Name: Neil Voss (@vosslab) Original Date: 2010-04-26T19:34:36Z


Eric has added the INFUTURE option to the wizard/

leginonbot commented 8 months ago

Original Redmine Comment Author Name: Amber Herold (Amber Herold) Original Date: 2010-04-29T19:41:37Z


Used HIDE_FEATURE in config.php to hide menu listings of incomplete features in prep for Appion 2.0 release. To use the features indicated in this issue, you must set HIDE_FEATURE to false. All features mentioned above were hidden with the exception of tomography and Manual Masking.

To test: The NRAMM - test project will include most of the features. Set the HIDE_FEATURE flag to both true and false to ensure features behave properly in both cases.

r13674

leginonbot commented 8 months ago

Original Redmine Comment Author Name: Amber Herold (Amber Herold) Original Date: 2010-06-16T18:53:18Z


Anchi tested