legumeinfo / ZZBrowse

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Move annotations and GWAS data to the LIS data store, then remove local versions #21

Open svengato opened 4 years ago

svengato commented 4 years ago

From the annotations and www/config/data subdirectories respectively.

svengato commented 4 years ago

Are pigeonpea GWAS data (in the same format as common bean, cowpea, and soybean, including marker and publication) ready to go on the data store?

adf-ncgr commented 4 years ago

no, I think this is likely to languish for a little while, but as a note to self these were (I think) taken from the publication: https://doi.org/10.1038/ng.3872 probably from Supp. Table 18 which doesn't actually give p-values, but says that the indicated marker-trait associations are all p-value < 0.05