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legumeinfo / datastore-issues

mostly for issues pertaining to the content of the legumeinfo datastore; may also relate to characteristics of its user interface or managing the mirroring process to the legfed instance
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new dataset: pisum sativum expression atlas #114

Closed adf-ncgr closed 3 months ago

adf-ncgr commented 2 years ago

not all that new, but one that we should incorporate when happy with the new procedures (and/or as part of testing said procedures): Full-length de novo assembly of RNA-seq data in pea (Pisum sativum L.) provides a gene expression atlas and gives insights into root nodulation in this species https://onlinelibrary.wiley.com/doi/10.1111/tpj.12967 read data available: https://www.ncbi.nlm.nih.gov/bioproject/267198

adf-ncgr commented 2 years ago

Will assign @el239 when he has accepted the github invite.

sammyjava commented 1 year ago

Any update on this analysis @el239 @adf-ncgr ? Just curious.

adf-ncgr commented 3 months ago

looks like this very old issue is nearly ready to be handled! @el239 did you get things worked out for access to the data store? If so, feel free to post this one up there.

el239 commented 3 months ago

Hello, very sorry for the rather later update. This dataset is ready, but I have not yet sorted out datastore access. Will update when it is ready.

el239 commented 3 months ago

This dataset is now available on the datastore.