mostly for issues pertaining to the content of the legumeinfo datastore; may also relate to characteristics of its user interface or managing the mirroring process to the legfed instance
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Vicia sativa genome (to go with our V. faba genomes) #166
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9650280/
Main steps for adding new genome and annotation collections
Genus/species/collection names:
What are the collection types and names? Example:
Lens/culinaris/genomes/CDC_Redberry.gnm2.7C5P
Lens/culinaris/annotations/CDC_Redberry.gnm2.ann1.5FB4
[ ] Add collection(s) to the Data Store
[ ] Validate the README(s)
[ ] Update about_this_collection.yml
[ ] Calculate AHRD functional annotations
[ ] Calculate gene family assignments (.gfa)
[ ] Add to pan-gene set
[ ] Load relevant mine
[ ] Add BLAST targets
[ ] Incorporate into GCV
[ ] Update the jekyll collections listing
[ ] Update browser configs
[ ] run BUSCO