Open StevenCannon-USDA opened 9 months ago
@StevenCannon-USDA I've put the AHRD/GFA/BUSCO updates for this one into the annex folders. If you want to give them a quick look before I move them into the data store proper, let me know otherwise I will probably just go ahead with this in a day or two.
Looks good to me. Thanks for handling this -
Main steps for adding new genome and annotation collections
Genus/species/collection names:
Glycine/max/genomes/Wm82.gnm6.S97D
Glycine/max/annotations/Wm82.gnm6.ann1.PKSW
[X] Add collection(s) to the Data Store, including commits to datastore-metadata
[X] Validate the README(s)
[ ] Update about_this_collection.yml
[x] Calculate AHRD functional annotations
[x] Calculate gene family assignments (.gfa)
[ ] Add to pan-gene set
[ ] Load relevant mine
[ ] Add BLAST targets
[ ] Incorporate into GCV
[ ] Update the jekyll collections listing
[ ] Update browser configs
[x] run BUSCO
[ ] Update DSCensor
[ ] Add LINKOUTS to datastore, refresh linkout service