BLAST jobs still time-out

[adf-ncgr]

Example:

• Resulted in a Gateway timeout, but ~50 minutes later:
  10.24.27.234 - - [27/Sep/2017:16:49:57 -0500] "GET /blast/report/PytsAHi HTTP/1.1" 504 247
• BLAST results were generated but results page won't load.
• Query file attached.

May be related to too-large output. Log contains Tripal errors like:

[Wed Sep 27 16:01:33.525383 2017] [proxy_fcgi:error] [pid 6473:tid 34506626048] [client 51.255.65.62:33292] AH01071: Got error 'PHP message: [TRIPAL ERROR] ERROR (TRIPAL_CORE): chado_expand_var: Could not expand analysisprop. The table is either not related to the base object through a foreign key relationships or it is already expanded. First check the object to ensure it doesn\xe2\x80\x99t already contain the data needed and otherwise check the table definition using chado_get_schema() to ensure a proper foreign key relationship is present...

[LEGUME-725] created by ecannon

[adf-ncgr]

More information from Jacqueline:

------------------
The user I was helping was looking at region ~71,000 bases in size which had 45 soybean gene models. I ran the 45 gene models with default BLAST parameters first and got way too many hits back. I ran the 45 gene models again but this time with different BLAST parameters: lower e-value and only 10 hits per query.

To be honest I was hoping your CViTjs could give me a visual to show the user. But CViTjs did not work with so many gene models, I used soybase while genome viewer instead.

by ecannon