legumeinfo / mine-issues

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external links to phylotrees broken in several senses #103

Closed adf-ncgr closed 1 year ago

adf-ncgr commented 1 year ago

e.g. https://mines.legumeinfo.org/arachismine/report.do?id=18017579 (note that the "shareable" URL comes up blank for this) sense 1 in which it is broken is that it seems to be making the gene family id in the generated link: java.lang.IllegalAccessException:%20Couldn't%20get%20field sense 2 in which it is broken is that these links should point to the new version of the tree display at (e.g.): https://funnotate.legumeinfo.org/?family=legfed_v1_0.L_8RDHM2

I'm assuming this is the same on all mines, though I have only noticed it working with arachismine.

sammyjava commented 1 year ago
  1. Shareable URLs hopefully fixed throughout; hadn't kept up with data model changes.
  2. GeneFamily.primaryIdentifier now used in link.
  3. Link updated to funnotate.

2 and 3 are correct on most mines, just three needed updating: