lehtiolab / ddamsproteomics

A Nextflow MS DDA proteomics pipeline
MIT License
3 stars 5 forks source link

Update status code for retries #10

Closed glormph closed 1 year ago

glormph commented 1 year ago

Maybe better to make this work without slurm as well, but earlier jobs got 143 (sigterm) when nextflow killed them. With new nextflow (since 21 something) SLURM is configured to signal SIGUSR2 instead. Possibly use e.g. 138..140, check docs, maybe ask in scilife