Open yafeng opened 5 years ago
Currently, the IPAW pipeline allows searching of label free data, but no quantification results. moFF is a MaxQuant equivalent command-line tool for MS1 quantification, including match-between-runs funtionality as well.
Other wise https://github.com/fickludd/dinosaur is also supposed to be a good MS1 quantifier.
Yes, that is also a nice alternative.
Currently, the IPAW pipeline allows searching of label free data, but no quantification results. moFF is a MaxQuant equivalent command-line tool for MS1 quantification, including match-between-runs funtionality as well.