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lemaslab / rump

A Reproducible Untargeted Metabolomics Data Processing Pipeline
MIT License
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Unknown Search Tool Development #58

Open XinsongDu opened 4 years ago

XinsongDu commented 4 years ago

CEU Mass Mediator has many drawbacks (e.g., their server is not stable, sometimes users cannot connect to it; their results do not have information like class, kindom, etc.). We need to develop a tool and incorporate it to RUMP for unknown search.

XinsongDu commented 4 years ago

Libraries like HMDB is very large and takes a very long time to be read into memory, it turns out using a server with pre-loaded databases might be a good choice.