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lentendu / DeltaMP

A flexible, reproducible and resource efficient metabarcoding amplicon pipeline for HPC
GNU General Public License v3.0
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Automatically detect original run library names in sequence filenames to execute dada2 per run without the need for demultiplexing #120

Closed lentendu closed 4 years ago

lentendu commented 4 years ago

remove sample name prefix in forward library name of lib3.list and check for identical libraries

lentendu commented 4 years ago

Also use the run information in Illumina_quality to create a statistical report per run/library