leoliuf / MRiLab

A Numerical Magnetic Resonance Imaging (MRI) Simulation Platform
https://leoliuf.github.io/MRiLab/
BSD 2-Clause "Simplified" License
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PSD_FIESTA3D #3

Closed romainVala closed 7 years ago

romainVala commented 7 years ago

Hello

I was interested to simulate the banding artefact for different phase cycling of th bSSFp sequence. So I play a little bit with the phase increment (CV3) I first test on the GM/WM/CSF phantome, with one uniform coil, uniform B0. with the default phase (2*pi/2) the image looks ok, but when I put a RF phase increment (CV3 = 0) I get a big aliasing (in the phase encoding direction) only for the csf compartment. I do not expect such an artifact ... Any idea where it may come from ?

Many thanks

Romain

leoliuf commented 7 years ago

Can you provide the screenshot to help diagnosis? When you mentioned one uniform coil and uniform B0, did you mean you used additional coil and mag for the simulation?

romainVala commented 7 years ago

Hello,

thanks for your prompt reply, I did not find how to put a screen shot in the web interface

So I did not select any coil neither B0, so it takes the default.

I only select the GM/WM/CSF phantome and the PSD_FIESTA3D sequence, with the CV3 at pi I get the first attached figure but with the CV3 = 0 I get the warping (only for CSF) (second attach file)

Many thanks

Romain

On 04/07/2017 05:38 PM, Fang Liu wrote:

Can you provide the screenshot to help diagnosis? When you mentioned one uniform coil and uniform B0, did you mean you used additional coil and mag for the simulation?

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leoliuf commented 7 years ago

Try to use smaller FlipAng and larger DP_Num (more dummy TR section). The artifact is caused by the transient steady-state signal from CSF. You can use SpinWatcher to check MR signal from individual voxel.

romainVala commented 7 years ago

ok, I will have a look, but I do not understand why his is dependent of the RF phase.

On 04/11/2017 02:58 AM, Fang Liu wrote:

Try to use smaller FlipAng and larger DP_Num (more dummy TR section). The artifact is caused by the transient steady-state signal from CSF. You can use SpinWatcher to check MR signal from individual voxel.

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub https://github.com/leoliuf/MRiLab/issues/3#issuecomment-293119662, or mute the thread https://github.com/notifications/unsubscribe-auth/AFWhusJxPApvUlU8pKtz0qrC8zvB018iks5rutA8gaJpZM4M3Cpo.

romainVala commented 7 years ago

Hi I notice a bug when I put a DP_Num greater than 700 (for 8 slices) it stop ate TR Counts = 640 or 700 (number of TR without dummy scan) and complains about wrong dimension. Strange because it works ok for smaller DP_NUM

Thanks

Romain

leoliuf commented 7 years ago

Yes, I noticed that too. I will possibly change the limitation of DP_Num to any number in the future version. So far, the DP_Num must be smaller than total phase encoding steps.