leppott / ContDataQC

Quality control checks on continuous data. Example data is from a HOBO data logger with 30 minute intervals.
https://leppott.github.io/ContDataQC/
MIT License
20 stars 10 forks source link

DO - add format PME MiniDot function #141

Closed leppott closed 2 years ago

leppott commented 2 years ago

Is your feature request related to a problem? Please describe. Similar to formatHobo function add a function for data files from PME MiniDot

Describe the solution you'd like see above

Describe alternatives you've considered NA

Additional context Have to edit files by hand. User submission by email 2022-03-07

formatHobo() code is here:

https://github.com/leppott/ContDataQC/blob/main/R/formatHobo.R

leppott commented 2 years ago

Manual

https://www.pme.com/wp-content/uploads/PME-miniDOT-Manual-2021.pdf

Example CAT.txt file after processing with miniDOTConcatentate java program.

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leppott commented 2 years ago

Code to compile the files if miniDOTConcatenate not used.

https://github.com/mnsentinellakes/mnsentinellakes/blob/master/R/compile_do_folder.R

leppott commented 2 years ago

Concatenate function added as minidot_cat.

leppott commented 2 years ago

minidot program adds DO Pct saturation column as NA if no inputs given for the calculation.

This causes ContDataQC() to crash (since all values NA).

Issue #143

leppott commented 2 years ago

https://github.com/leppott/ContDataQC/commit/6b1af4e0b142e8287551593997a3511eee1ae261

v2.0.6.9024

leppott commented 2 years ago

Shiny

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