Open leppott opened 6 years ago
Will have to cut down on file size. Extdata is 23.5 MB.
Several other things to fix but shouldn't affect functionality of the package at this time.
R CMD check results 1 error | 4 warnings | 5 notes
v1.0.2.9005 (2017-07-31)
checking for portable file names ... WARNING Found the following files with non-portable file names: data-raw/December 2016 - Salt Results - Final.xlsx inst/extdata/BIBI 1998 (Stribling et al.) (ea-99-6).pdf inst/extdata/MBSS Install Guide.pdf inst/extdata/PHI Worksheet_from MP (Erik20170329).xls inst/extdata/Paul et al. 2003_MBSS (ea-03-4_phi).pdf inst/extdata/Southerland et al_2005 (MBSS_new_ibi) (ea-05-13).pdf
checking for missing documentation entries ... WARNING Undocumented code objects: 'metric.values.algae' 'metric.values.bugs' 'metric.values.fish' All user-level objects in a package should have documentation entries. See chapter 'Writing R documentation files' in the 'Writing R Extensions' manual.
checking for unstated dependencies in examples ... WARNING Warning: parse error in file 'MBSStools-Ex.R': 16: unexpected ',' 29: #write.table(flow.sample,paste0("SumFlow",myYear,"_",datetime,".tab"), 30: row.names=FALSE, ^
checking data for non-ASCII characters ... WARNING Warning: found non-ASCII strings 'ATKI-102-X-2016 ' in object 'taxa_bugs_family' 'ATKI-102-X-2016 ' in object 'taxa_bugs_genus'
Addressing CMD check issues with help of CodeFactor, codecov, lintr, and goodpractices.
Run Check and make the package CRAN ready.