Open leppott opened 5 months ago
Added language to function help to reinforce that values used in the function are different from those in the published report due to the different mathematical operator used in the function.
code for scroing:
Need to QC then can close.
Describe the bug Unlike genus BIBI the Family BIBI uses "greater than" instead of "greater than or equal" for its thresholds. The values entered in to the rules table did not adjust for this and values at the upper threshold are being scored a "5" instead of a "3".
To Reproduce Steps to reproduce the behavior:
Expected behavior A clear and concise description of what you expected to happen.
Screenshots
Metric thresholds from report.
Additional context Revised threshold values provided by MBSS staff.
Unlike the
BioMonTools
package that uses an Excel file the extdata folder theMBSStools
package has the values in the package as an internal data file. Revise the .tab file and process data script in "data-raw" folder.