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lgatto / Pbase

Manipluating and exploring protein and proteomics data
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Pbase FTBFS #4

Closed sgibb closed 10 years ago

sgibb commented 10 years ago

Dear Laurent,

Pbase fails to build from source on BioC because Pviz is still missing:

http://www.bioconductor.org/checkResults/devel/bioc-LATEST/Pbase/

Possible solutions:

  1. Remove the plot function (temporary).
  2. Replace the Pviz functions by their corresponding Gviz functions (temporary).
  3. Put Pviz in Suggests: and remove the plot function from the man page example.

What do you think? Do you have any other idea?

Best wishes,

Sebastian

lgatto commented 10 years ago

Let's go for 3 for now and may add if (require("PViz")) plot(...).

sgibb commented 10 years ago

Ok, I applied the third solution. Could you please upload it to BioC?

lgatto commented 10 years ago

Done.