plot2D with t-SNE and duplicated features fails

lgatto / pRoloc

A unifying bioinformatics framework for organelle proteomics

http://lgatto.github.io/pRoloc/

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plot2D with t-SNE and duplicated features fails #108

Closed lgatto closed 6 years ago

lgatto commented 6 years ago

> plot2D(tan2009r1, method = "t-SNE")
Loading required namespace: Rtsne
Only keeping unique features, dropped 1.
Error in .data[ukn, 1] : (subscript) logical subscript too long

The filtering of duplicated features is applied on the quantitative data only. It should also filter out the corresonding feature data.