lgatto / synapter

Label-free data analysis pipeline for optimal identification and quantitation
https://lgatto.github.io/synapter/
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Adjustment of RT and mass windows #104

Open lgatto opened 9 years ago

lgatto commented 9 years ago

Just an idea here, that we might consider in the future. We do better than many other methods in defining the RT and mass with for identification transfer. Indeed, rather than using arbitrary values, we estimate it based on the data. Still, we use a single RT/mass with over the full retention time and mass ranges. I was wondering if we couldn't optimise for different optima in different regions of the MS space.