lh3 / bwa

Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
GNU General Public License v3.0
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SAM parsing error: Incomplete line #321

Open siqi-zZ opened 3 years ago

siqi-zZ commented 3 years ago

sort -r ucsc.hg19.genome.fa -o /a23916.sorted.bam -t 24 --sam2bam -i - [M::bwa_idx_load_from_disk] read 0 ALT contigs [bwt_resample_sa] Failed to allocate 6191354832 bytes at bwt.c line 809: Cannot allocate memory SAM parsing error: Incomplete line (without EOL), at line starting as "error"