lh3 / dipcall

Reference-based variant calling pipeline for a pair of phased haplotype assemblies
MIT License
94 stars 9 forks source link

no documentation for bedtk isec -m flag used in making confident regions bed for females #7

Open juniper-lake opened 2 years ago

juniper-lake commented 2 years ago

Line 119 in run-dipcall%3B) makes the confident regions bed file for females and uses the command bedtk isec -m but to my knowledge there's no documentation for the -m flag in bedtk isec.