fml-asm: mrope.c:230: mr_insert_multi: Assertion `len > 0 && s[len-1] == 0' failed.

lh3 / fermi-lite

Standalone C library for assembling Illumina short reads in small regions

MIT License

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Closed davisem closed 5 years ago

davisem commented 5 years ago

This exception is thrown when short sequences are encountered.

@0:1    4281    .    .
CCCACAGAACTAAAACAGAAGAATTCTC
@0:2    4281    .    .
CCTAGACAGAACCCATCTAAGAAACGAC

I have seen this on occasion when a read is truncated.

Thanks.

lh3 commented 5 years ago

Let me know if the problem persists. Thanks!