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lh3 / fermi-lite

Standalone C library for assembling Illumina short reads in small regions
MIT License
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expose min_elen as a command line option #8

Open nh13 opened 7 years ago

nh13 commented 7 years ago

https://github.com/lh3/fermi-lite/issues/7

nh13 commented 7 years ago

@lh3 I'll need advice on what this parameter actually does (for the command line description), as well as if any other parameters are affected. Thanks for any help in advance.

nh13 commented 7 years ago

If I add a single mismatch in a read, interestingly I get two contigs. Weird.