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lh3 / miniasm

Ultrafast de novo assembly for long noisy reads (though having no consensus step)
MIT License
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bad gateway for test data #4

Closed ekg closed 8 years ago

ekg commented 8 years ago

Hi @lh3,

I get this error when trying to download the test data:

➜  minis  wget -O reads.fa http://nanopore.climb-radosgw01.bham.ac.uk/MAP006-1_2D_pass.fasta
--2015-11-27 15:23:33--  http://nanopore.climb-radosgw01.bham.ac.uk/MAP006-1_2D_pass.fasta
Resolving nanopore.climb-radosgw01.bham.ac.uk (nanopore.climb-radosgw01.bham.ac.uk)... 147.188.173.15
Connecting to nanopore.climb-radosgw01.bham.ac.uk (nanopore.climb-radosgw01.bham.ac.uk)|147.188.173.15|:80... connected.
HTTP request sent, awaiting response... 502 Bad Gateway
2015-11-27 15:23:33 ERROR 502: Bad Gateway.

Looks like this isn't up: http://nanopore.climb-radosgw01.bham.ac.uk/

Is there another suitable public dataset we could use, or could we host this elsewhere?

lh3 commented 8 years ago

Try the example data set from PBcR.

lh3 commented 8 years ago

README updated. Also updated the demo scripts in the misc/ directory.

nickloman commented 8 years ago

Sorry about that, can you use this instead:

http://s3.climb.ac.uk/nanopore/MAP006-1_2D_pass.fasta

Also other links updated:

http://s3.climb.ac.uk/nanopore/MAP006-2_2D_pass.fasta http://s3.climb.ac.uk/nanopore/MAP006-PCR-1_2D_pass.fasta http://s3.climb.ac.uk/nanopore/MAP006-PCR-2_2D_pass.fasta