lh3 / miniasm

Ultrafast de novo assembly for long noisy reads (though having no consensus step)
MIT License
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Minidot invalid option -- 'D' #95

Open JKing2000 opened 1 month ago

JKing2000 commented 1 month ago

Version: miniasm-0.3 Issue: the minidot command not taking -D as a valid option

Details: The minidot usage has -D as don't put hits on diagonal, I assume this means when doing self-alignment it would only plot the non-self alignments in the output eps, but it seems this option is invalid when you provide it to minidot.

the command: minidot -D test.paf > test.eps && epstopdf test.eps output: minidot: invalid option -- 'D'