lh3 / minigraph

Sequence-to-graph mapper and graph generator
https://lh3.github.io/minigraph
MIT License
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some warnings while generating a genome graph #94

Open hxt163 opened 1 year ago

hxt163 commented 1 year ago

Hello! I encountered some warning messages while trying to generate a genome graph... I want to know what causes this, should I be concerned about this, and does it have any impact on the follow-up study Any suggestion would be appreciated!

[W::gfa_ins_filter] multi-link between >s31683 and >s31685 derived from the 1-th query at 31500218-31500218 [W::gfa_ins_filter] multi-link between >s213681 and >s213683 derived from the 1-th query at 23208975-23208975 [W::gfa_ins_filter] multi-link between >s42236 and >s42237 derived from the 2-th query at 23501091-23501091 [W::gfa_ins_filter] multi-link between >s45566 and >s45567 derived from the 2-th query at 31514402-31514402 [W::gfa_ins_filter] impossible insertbetween >s47785 and <s177767 derived from the 2-th query at 37880003-37880003 [W::gfa_ins_filter] impossible insert between s177767 derived from the 2-th query at 37880313-37880313 [W::gfa_ins_filter] multi-link between >s58519 and >s58520 derived from the 3-th query at 24257897-24257897 [W::gfa_ins_filter] multi-link between >s214931 and >s214932 derived from the 3-th query at 6240079-6240079 [W::gfa_ins_filter] multi-link between >s214932 and >s214933 derived from the 3-th query at 6241187-6241187