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lh3 / miniprot

Align proteins to genomes with splicing and frameshift
https://lh3.github.io/miniprot/
MIT License
312 stars 17 forks source link

Coding exon limit #1

Open husamia opened 1 year ago

husamia commented 1 year ago

Does it work will with super short exons like a single codon in length?

lh3 commented 1 year ago

No, it doesn't. Small exons are hard. There are multiple easier and more obvious issues I need to improve first.