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lh3 / miniprot

Align proteins to genomes with splicing and frameshift
https://lh3.github.io/miniprot/
MIT License
312 stars 17 forks source link

Too many results #8

Closed wjq1981 closed 1 year ago

wjq1981 commented 1 year ago

Hi, I run the default parameters and the result is very much. There are more than 1 million mRNAs. Are there any remaining parameters I can adjust? Or filter the results according to Identity or Positive?

lh3 commented 1 year ago

You probably have many homologous genes in the input. You have to use a separate tool to select or merge gene models.