Partial genes and structural variations

lh3 / pangene

Constructing a pangenome gene graph

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Open duelstrobe opened 6 months ago

duelstrobe commented 6 months ago

Hello,

is it possible to see differences in lengths in genes like for structural variations ?

Thank you in advance!

lh3 commented 5 months ago

This information is not kept in the graph. If a gene is affected by SV, it may be filtered. I haven't closely looked at this. I will keep this open.